＊ Phylum Crenarchaeota
＊ Class Thermoprotei
＊ Phylum Euryarchaeota
＊ Class Archaeoglobi
＊ Class Halobacteria
＊ Class Methanobacteria
＊ Class Methanococci
＊ Class Methanopyri
＊ Class Thermoplasmata
＊ Class Thermococci
＊ Phylum Korarchaeota
＊ Phylum Nanoarchaeota
真正細菌
Bergey's Manual of Determinative Bacteriologyによるもの。
＊ SECTION 1 [The Spirochetes]
＊ Order Spirochaetales
＊ Family Leptospiraceae [II]
Genus Leptospira
＊ Family Spirochaetaceae [I]
Genus Borrelia [IV]
Genus Cristispira [II]
Genus Spirochaeta [I]
Genus Treponema [III]
＊ [Other Organisms]
＊ Hindgut Spirochetes of Termites and Cryptocercus punctulatus
＊ SECTION 2 [Aerobic/Microaerophilic, Motile, Helical/Vibrioid Gram-Negative Bacteria]
Genus Aquaspirillum
Genus Azospirillum
Genus Bdellovibrio
Genus Campylobacter
Genus Oceanospirillum
Genus Spirillum
Genus Vampirovibrio
＊ SECTION 3 [Nonmotile (or Rarely Motile), Gram-Negative Curved Bacteria]
＊ Family Spirosomaceae
Genus Flectobacillus [III]
Genus Runella [II]
Genus Spirosoma [I]
＊ [Other Genera]
Genus Brachyarus
Genus Meniscus
Genus Microcyclus
Genus Pelosigma
＊ SECTION 4 [Gram-Negative Aerobic Rods and Cocci]
＊ Family Acetobacteraceae [VI]
Genus Acetobacter [I]
Genus Gluconobacter [II]
＊ Family Azotobacteraceae [II]
Genus Azotobacter [I]
Genus Azomonas [II]
＊ Family Halobacteriaceae [V]
Genus Halobacterium [I]
Genus Halococcus [II]
＊ Family Legionellaceae [VII]
Genus Legionella [I]
＊ Family Methylococcaceae [IV]
Genus Methylococcus [I]
Genus Methylomonas [II]
＊ Family Neisseriaceae [VIII]
Genus Acinetobacter [III]
Genus Kingella [IV]
Genus Moraxella [II]
Genus Neisseria [I]
＊ Family Pseudomonadaceae [I]
Genus Frateuria [III]
Genus Pseudomonas [I]
Genus Xanthomonas [II]
Genus Zoogloea [IV]
＊ Family Rhizobiaceae [III]
Genus Agrobacterium [III]
Genus Bradyrhizobium [II]
Genus Phyllobacterium [IV]
Genus Rhizobium [I]
＊ [Other Genera]
Genus Alcaligens
Genus Alteromonas
Genus Beijerinckia
Genus Bordetella
Genus Brucella
Genus Derxia
Genus Flavobacterium
Genus Francisella
Genus Halomonas
Genus Janthinobacterium
Genus Lampropedia
Genus Paracoccus
Genus Serpens
Genus Thermomicrobium
Genus Thermus
Genus Xanthobacter
＊ SECTION 5 [Facultatively Anaerobic Gram-Negative Rods]
＊ Family Enterobacteriaceae [I]
Genus Cedecea
Genus Citrobacter [IV]
Genus Edwardsiella [X]
Genus Enterbacter [VI]
Genus Erwinia [VII]
Genus Escherichia [I]
Genus Hafnia [IX]
Genus Klebsiella [V]
Genus Kluyvera
Genus Morganella [XIII]
Genus Obesumbacterium
Genus Proteus [XI]
Genus Provindencia [XII]
Genus Rahnella
Genus Salmonella [III]
Genus Serratia [VIII]
Genus Shigella [II]
Genus Tatumella
Genus Xenorhabdus
Genus Yersina [XIV]
＊ Family Pasteurellaceae [III]
Genus Actinobacillus [III]
Genus Haemophilus [II]
Genus Pasteurella [I]
＊ Family Vibrionaceae [II]
Genus Aeromonas [III]
Genus Photobacterium [II]
Genus Plesiomonas [IV]
Genus Vibrio [I]
＊ [Other Genera]
Genus Calymmatobacterium
Genus Cardiobacterium
Genus Gardnerella
Genus Chromobacterium
Genus Eikenella
Genus Streptobacillus
Genus Zymomonas
＊ SECTION 6 [Anaerobic Gram-Negative Straight, Curved, and Helical Rods]
＊ Family Bacteroidaceae [I]
Genus Acetivibrio [XII]
Genus Anaerobiospirillum [VII]
Genus Anaerovibrio [X]
Genus Bacteroides [I]
Genus Butyrivibrio [IV]
Genus Fusobacterium [II]
Genus Lachnospira [XIII]
Genus Leptotrichia [III]
Genus Pectinatus [XI]
Genus Selenomonas [IX]
Genus Succinimonas [V]
Genus Succinivibrio [VI]
Genus Wolinella [VIII]
＊ SECTION 7 [Dissimilatory Sulfate- or Sulfur-Reducing Bacteria]
Genus Desulfobacter
Genus Desulfobulbus
Genus Desulfococcus
Genus Desulfomonas
Genus Desulfuromonas
Genus Desulfosarcina
Genus Desulfovibrio
＊ SECTION 8 [Anaerobic Gram-Negative Cocci]
＊ Family Veillonellaceae [I]
Genus Acidaminococcus [II]
Genus Megasphaera [III]
Genus Veillonella [I]
＊ SECTION 9 [The Rickettsias and Chlamydias]
＊ Order Chlamydiales [II]
＊ Family Chlamydiaceae [I]
Genus Chlamydia [I]
＊ Order Rickettsiales [I]
＊ Family Anaplasmataceae [III]
Genus Anaplasma [I]
Genus Aegyptianella [II]
Genus Eperythrozoon [IV]
Genus Haemobartonella [III]
＊ Family Bartonellaceae [II]
Genus Bartonella [I]
Genus Grahamella [II]
＊ Family Rickettsiaceae [I]
＊ Tribe Ehrlichieae [II]
Genus Cowdria [V]
Genus Ehrlichia [IV]
Genus Neorickettsia [VI]
＊ Tribe Rickettsieae [I]
Genus Coxiella [III]
Genus Rickettsia [I]
Genus Rochalimaea [II]
＊ Tribe III Wolbachieae
Genus Rickettsiella [VIII]
Genus Wolbachia [VII]
＊ SECTION 10 [The Mycoplasmas]
＊ Division Tenericutes
＊ Class Mollicutes [I]
＊ Order Mycoplasamatales [I]
＊ Family Acholeplasmataceae [II]
Genus Acholeplasma [I]
＊ Family Mycoplasmataceae [I]
Genus Mycoplasma [I]
Genus Ureaplasma [II]
＊ Family Spiroplasmataceae [III]
Genus Spiroplasma [I]
＊ [Other Genera]
Genus Anaeroplasma
Genus Thermoplasma
Mycoplasma-Like Organisms of Plant and Invertebrates
＊ SECTION 11 Endosymbionts
＊ [Endosymbionts of Protozoa, Endosymbionts of ciliates, Endosymbionts of flagellates, Endosymbionts of amoebas]
Genus Caedibacter [II]
Genus Holospora [I]
Genus Lyticum [IV]
Genus Pseudocaedibacter [III]
Genus Tectibacter [V]
＊ [Endosymbionts of Insects, Bloodsucking insects, Plant sap-sucking insects, Cellulose and stored grain feeders, Insects feeding on complex diets]
Genus Blattabacterium
＊ [Endosymbionts of Fungi and Invertebrates Other Than Arthropods (Fungi, Sponges, Coelenterates, Helminthes, Annelids[環形動物], Marine worms[環形動物] and mollusks)]
＊ SECTION 12 Gram-Positive Cocci
＊ Family Deinococcaceae [II]
Genus Deinococcus [I]
＊ Family Micrococcaceae [I]
Genus Micrococcus [I]
Genus Planococcus [III]
Genus Staphylococcus [IV]
Genus Stomatococcus [II]
＊ [Other Genera (Streptococci)]
Genus Aerococcus
Genus Coprococcus
Genus Leuconostoc
Genus Gemella
Genus Pediococcus
Genus Peptostreptococcus
Genus Ruminococcus
Genus Sarcina
Genus Streptococcus [Pyogenic Hemolytic Streptococci, Oral Streptococci, Enterococci, Lactic Acid Streptococci, Anaerobic Streptococci]
＊ SECTION 13 [Endospore-Forming Gram-Positive Rods and Cocci]
Genus Bacillus
Genus Clostridium
Genus Desulfotomaculum
Genus Oscillospira
Genus Sporolactobacillus
Genus Sporosarcina
＊ SECTION 14 [Regular, Nonsporing, Gram-Positive Rods]
Genus Brochothrix
Genus Caryophanon
Genus Erysipelothrix
Genus Kurthia
Genus Lactobacillus
Genus Listeria
Genus Renibacterium
＊ SECTION 15 [Irregular, Nonsproing, Gram-Positive Rods]
Genus Acetobacterium
Genus Actinomyces
Genus Agromyces
Genus Arcanobacterium
Genus Arachnia
Genus Arthrobacter
Genus Aureobacterium
Genus Bifidobacterium
Genus Brevibacterium
Genus Butyrivibrio
Genus Caseobacter
Genus Cellulomonas
Genus Corynebacterium (Plant Pathogenic Species of Corynebacterium)
Genus Curtobacterium
Genus Eubacterium
Genus Gardnerella
Genus Lachnospira
Genus Microbacterium
Genus Propionibacterium
Genus Rothia
Genus Thermoanaerobacter
＊ SECTION 16 The Mycobacteria
＊ Family Mycobacteriaceae
Genus Mycobacterium
＊ SECTION 17 Nocardioforms
Genus Intrasporangium
Genus Micropolyspora
Genus Nocardia
Genus Nocardioides
Genus Oerskovia
Genus Promicromonospora
Genus Rhodococcus
Genus Pseudonocardia
Genus Saccharopolyspora
＊ SECTION 18 [Anoxygenic Phototrophic Bacteria]
＊ [Green Bacteria]
＊ [Green Sulfur Bacteria]
Genus Ancalochloris
Genus Chlorobium
Genus Chloroherpeton
Genus Pelodictyon
Genus Prosthecochloris
＊ [Multicellular, Filamentous, Green Bacteria]
Genus Chloroflexus
Genus Chloronema
Genus Heliothrix
Genus "Oscillochloris"
＊ [Green Incertae Sedis]
Genus Erythrobacter
Genus Heliobacterium
＊ [Purple bacteria]
＊ Family Chromatiaceae [I]
Genus Amoebobacter [VIII]
Genus Chromatium [I]
Genus Lamprobacter [V]
Genus Lamprocystis [VI]
Genus Thiocapsa [IV]
Genus Thiocystis [II]
Genus Thiodictyon [VII]
Genus Thiopedia [IX]
Genus Thiospirillum [III]
＊ Family Ectothiorhodospiraceae [II]
Genus Ectothiorhodospira
＊ [Purple Nonsulfur Bacteria]
Genus Rhodobacter
Genus Rhodocyclus
Genus Rhodomicrobium
Genus Rhodopila
Genus Rhodopseudomonas
Genus Rhodospirillum
＊ SECTION 19 Oxygenic Photosynthetic Bacteria
＊ Group I Cyanobacteria
＊ Sub-Section Order Chroococcales [I]
Genus Chamaesiphon [I]
Genus Gloeobacter [Synechococcus-Group] [II]
Genus Gloeothece [Cyanothece-Group, Gloeocapsa-Group Synechocystis-Group] [III]
＊ Sub-Section Order Nostocales [IV]
＊ Family Nostocaceae [I]
Genus Anabaena [I]
Genus Aphanizomenon [II]
Genus Cylindrospermum [IV]
Genus Nodularia [III]
Genus Nostoc [V]
＊ Family Scytonemataceae [II]
Genus Scytonema [I]
＊ Family Rivulariaceae [III]
Genus Calothrix [I]
＊ Sub-Section Order Oscillatoriales [III]
Genus Arthrospira [II]
Genus Crinalium [VII]
Genus Lyngbya [IV]
Genus Microcoleus [VIII]
Genus Oscillatoria [III]
Genus Pseudanabaena [V]
Genus Spirulina [I]
Genus Starria [VI]
＊ Sub-Section Order Pleurocapsales [II]
Genus Chroococcidiopsis [Pleurocapsa-Group] [V]
Genus Dermocarpa [I]
Genus Dermocarpella [III]
Genus Mxyosarcina [IV]
Genus Xenococcus [II]
＊ Sub-Section V Order Stigonematales
Genus Chlorogloeopsis [I]
Genus Fischerella [II]
Genus Geitleria
Genus Stigonema [III]
＊ Group II Order Prochlorales
＊ Family I Prochloraceae
Genus Prochloron
＊ [Other Taxa]
Genus "Prochlorothrix"
＊ SECTION 20 [Aerobic Chemolithotrophic Bacteria and Associated Organisms]
＊ [Colourless Sulfur Bacteria]
Genus Acidiphilium
Genus Macromonas
Genus Thermothrix
Genus Thiobacillus
Genus Thiobacterium
Genus Thiomicrospira
Genus Thiosphaera
Genus Thiospira
Genus Thiovulum
＊ [Iron- and Manganese-Oxidizing and/or Depositing Bacteria]
＊ Family Siderocapsaceae
Genus Naumanniella [II]
Genus Ochrobium [IV]
Genus Siderocapsa [I]
Genus Siderococcus [III]
＊ [Magnetotactic Bacteria]
Genus Aquaspirillum Aquaspirillum magnetotacticum
Genus "Bilophococcus"
＊ [Nitrifying Bacteria]
＊ Family Nitrobacteraceae
＊ [Nitrite-Oxidizing Bacteria]
Genus Nitrobacter [I]
Genus Nitrococcus [III]
Genus Nitrospina [II]
Genus Nitrospira [IV]
＊ [Ammonia-Oxidizing Bacteria]
Genus Nitrosococcus [VI]
Genus Nitrosolobus [VIII]
Genus Nitrosomonas [V]
Genus Nitrosospira [VII]
Genus Nitrosovibrio [IX]
＊ [Obligately Chemolithotrophic Hydrogen Bacteria]
Genus Hydrogenobacter
＊ SECTION 21 [Budding and/or Appendaged Bacteria]
＊ [Prosthecate Bacteria]
＊ [Budding Bacteria]
＊ [Buds Produced at Tip of Prostheca]
Genus Hyphomicrobium
Genus Hyphomonas
Genus Pedomicrobium
＊ [Buds Produced on Cell Surface]
Genus Ancalomicrobium
Genus Labrys
Genus Prosthecomicrobium
Genus Stella
＊ [Bacteria That Divide by Binary Transverse Fission]
Genus Asticcacaulis
Genus Caulobacter
Genus Prosthecobacter
＊ [Nonprosthecate Bacteria]
＊ [Budding Bacteria]
＊ [Lack Peptidoglycan]
＊ [Contain Peptidglycan]
Genus Angulomicrobium
Genus Blastobacter
Genus Ensifer
Genus Gemmiger
Genus Isosphaera
Genus Planctomyces
＊ [Nonbudding, Stalked Bacteria]
Genus Gallionella
Genus Nevskia
＊ [Other Bacteria]
＊ [Nonspinate Bacteria]
Genus "Metallogenium" ※マンガン酸化細菌。マンガン酸化物構造体とも呼ばれる(生物と認めない場合)。 Metallogenium personatum Metallogenium symbioticum
Genus Seliberia
Genus "Thiodendron"
＊ [Spinate Bacteria]
＊ SECTION 22 [Sheathed Bacteria]
Genus "Clonothix"
Genus "Crenothrix"
Genus Haliscomenobacter
Genus Leptothrix
Genus "Lieskeella"
Genus "Phargmidiothrix"
Genus Sphaerotilus
＊ SECTION 23 [Nonphotosynthetic, Nonfruiting Gliding Bacteria]
＊ Order Beggiatoales [III]
＊ Family Beggiatoaceae [I]
Genus Beggiatoa [I]
Genus Thiothrix [II]
Genus Thioploca [III]
Genus "Thiospirillopsis" [IV]
＊ Family "Pelonemataceae"
Genus "Pelonema" [I]
Genus "Achroonema" [II]
Genus "Peloploca" [III]
Genus "Desmanthos" [IV]
Genus Toxothrix
Genus Leucothrix
Genus Vitreoscilla
Genus Desulfonema
Genus Achromatium
Genus Agitococcus
Genus Herpetosiphon
＊ Family Simonsiellaceae
Genus Simonsiella [I]
Genus Alysiella [II]
＊ Order Cytophagales [I]
＊ Family Cytophagaceae [I]
Genus Chitinophaga
Genus Capnocytophaga [II]
Genus Cytophaga [I]
Genus Flexibacter
Genus Flexithrix [III]
Genus Microscilla
Genus Sporocytophaga
＊ [Other Genera]
Genus Saprospira
＊ Order Lysobacterales [II]
＊ Family Lysobacteraceae [I]
Genus Lysobacter [I]
＊ SECTION 24 [Fruiting Gliding Bacteria, The Myxobacteria]
＊ Order Myxococcales
＊ Family Archangiaceae [II]
Genus Archangium
＊ Family Cystobacteraceae [III]
Genus Cystobacter [I]
Genus Melittangium [II]
Genus Stigmatella [III]
＊ Family Myxococcaceae [I]
Genus Myxococcus
＊ Family Polyangiaceae [IV]
Genus Chondromyces [III]
Genus Nannocystis [II]
Genus Polyangium [I]
＊ SECTION 25 [Archaeobacteria]
＊ Group [Archaeobacterial Sulfate Reducers] [II]
＊ Order "Archaeoglobales"
＊ Family "Archaeoglobaceae
Genus Archaeoglobus
＊ Group [Cell Wall-Less Archaeobacteria] [IV]
Genus Thermoplasma
＊ Group [Extremely Halophilic Archaeobacteria] [III]
＊ Order Halobacteriales
＊ Family Halobacteriaceae
Genus Haloarcula [II]
Genus Halobacterium [I]
Genus Halococcus [IV]
Genus Haloferax [III]
Genus Natronobacterium [V]
Genus Natronococcus [VI]
＊ Group [Extremely Thermophilic SO-Metabolizers] [V]
＊ Order Thermococcales [I]
＊ Family Thermococcaceae
Genus Pyrococcus [II]
Genus Thermococcus [I]
＊ Order Sulfolobales [III]
＊ Family Sulfolobaceae
Genus Acidianus
Genus Sulfolobus [I]
＊ Order Thermoproteales [II]
＊ Family Desulfurococcaceae [II]
Genus Desulfurococcus
＊ Family Thermoproteaceae [I]
Genus Thermofilum [II]
Genus Thermoproteus [I]
＊ [Other Genera]
Genus Pyrodictium
Genus Staphylothermus
＊ Group [Methanogenic Archaeobacteria] [I]
＊ Order Methanobacteriales [I]
＊ Family Methanobacteriaceae [I]
Genus Methanobacterium [I]
Genus Methanobrevibacter [II]
＊ Family Methanothermaceae [II]
Genus Methanothermus
＊ Order Methanococcales [II]
＊ Family Methanococcaceae
Genus Methanococcus
＊ Order Methanomicrobiales [III]
＊ Family Methanomicrobiaceae [I]
Genus Methanogenium [III]
Genus Methanomicrobium [I]
Genus Methanospirillum [II]
＊ Family Methanoplanaceae
Genus Methanoplanus
＊ Family Methanosarcinaceae [II]
Genus Methanococcoides [IV]
Genus Methanolobus [II]
Genus Methanosarcina [I]
Genus Methanothrix [III]
＊ [Other Genera]
Genus Methanosphaera
＊ SECTION 26 [Nocardioform Actinomycetes]
Genus Actinopolyspora
Genus Faenia
Genus Intrasporangium
Genus Nocardia
Genus Nocardioides
Genus Oerskovia
Genus Promicromonospora
Genus Pseudonocardia
Genus Rhodococcus
Genus Saccharomonospora
Genus Saccharopolyspora
＊ SECTION 27 [Actinomycetes with Multilocular Sporangia]
Genus Dermatophilus
Genus Frankia
Genus Geodermatophilus
＊ SECTION 28 [Actinoplanetes]
Genus Actinoplanes
Genus Ampullariella
Genus Dactylosporangium
Genus Micromonospora
Genus Pilimelia
＊ SECTION 29 [Streptomycetes and Related Genera]
Genus Kinesporia
Genus Sporichthya
Genus Streptomyces
Genus Streptoverticillium
＊ SECTION 30 [Maduromycetes]
Genus Actinomadura
Genus Microbispora
Genus Microtetraspora
Genus Planobispora
Genus Planomonospora
Genus Spirillospora
Genus Streptosporangium
＊ SECTION 31 [Thermomonospora and Related Genera]
Genus Actinosynnema
Genus Nocardiopsis
Genus Streptoalloteichus
Genus Thermomonospora
＊ SECTION 32 [Thermoactinomycetes]
Genus Thermoactinomyces
＊ SECTION 33 [Other Genera]
Genus Glycomyces
Genus Kibdelosporangium
Genus Kitasatosporia
Genus Pasteuria
Genus Saccharothrix 旧分類
Kingdom Monera
＊ Phylum Acidobacteria
＊ Phylum Actinobacteria
＊ Class Actinobacteria
＊ Sub-Class Actinobacteridae
＊ Order Actinomycetales
＊ Sub-Order Actinomycineae
＊ Sub-Order Corynebacterineae
＊ Family Mycobacteriaceae
Genus Mycobacterium Mycobacterium avium 鳥型結核菌 Mycobacterium bovis 牛型結核菌 Mycobacterium chelonei ※抗酸菌症(魚類)原因菌 Mycobacterium chelonei ssp.abscessus Mycobacterium chelonei ssp.chelonei Mycobacterium flavescens Mycobacterium fortuitum ※抗酸菌症(魚類)原因菌 Mycobacterium gastri Mycobacterium gordeonae Mycobacterium kansasii Mycobacterium leprae Mycobacterium marinum ※抗酸菌症(魚類)原因菌 Mycobacterium paratuberculosis Mycobacterium phlei Mycobacterium scroflaceum Mycobacterium simiae Mycobacterium smegmatis 恥垢菌 Mycobacterium szulgai Mycobacterium triviae Mycobacterium tuberculosis 結核菌 Mycobacterium ulcerans Mycobacterium vaccae Mycobacterium xenopi
＊ Family Nocardiaceae
Genus Nocardia Nocardia asteroides Nocardia brasiliensis Nocardia canicruria Nocardia erythropolis Nocardia kampachi ※カンパチのノカルディア症 Nocardia mediterranei Nocardia opaca Nocardia seriolae ※抗酸菌症(魚類)原因菌
＊ Sub-Order Frankineae
＊ Sub-Order Glycomycineae
＊ Sub-Order Micrococcineae
＊ Family Micrococcaceae
Genus Arthrobacter
Genus Kocuria
Genus Micrococcus
Genus Nesterenkonia
Genus Renibacterium Renibacterium salmoninarum ※細菌性腎臓病原因菌
Genus Rothia
Genus Stomatococcus
＊ Sub-Order Micromonosporineae
＊ Sub-Order Propionibacterineae
＊ Sub-Order Pseudonocardineae
＊ Sub-Order Streptomycineae
＊ Sub-Order Streptosporangineae
＊ Phylum Aquificae
＊ Phylum Bacteroidetes
＊ Class Flavobacteria
＊ Order Flavobacteriales
＊ Family Blattabacteriaceae
＊ Family Flavobacteriaceae
Genus Bergeyella
Genus Capnocytophaga
Genus Cellulophaga
Genus Chryseobacterium
Genus Coenonia
Genus Empedobacter
Genus Flavobacterium Flavobacterium aquatile Flavobacterium branchiophilum ※細菌性鰓病原因菌 Flavobacterium columnare ※カラムナリス病原因菌
syn.Chondrococcus columnaris Cytophaga columnaris Flexibacter columnaris Flavobacterium ferrugineum Flavobacterium flevense Flavobacterium gastricum Flavobacterium hibernum Flavobacterium hydatis Flavobacterium johnsoniae Flavobacterium keratolyticus Flavobacterium mizutaii Flavobacterium ogurii Flavobacterium paraogurii Flavobacterium pectinovorum Flavobacterium psychrophilum ※冷水病原因菌 Flavobacterium saccharophilum Flavobacterium salegens Flavobacterium succinicans Flavobacteriumuliginosum Flavobacterium xanthum Flavobacterium xylanivorum Flavobacterium yabuuchiae
Genus Gelidibacter
Genus Ornithobacterium
Genus Polaribacter
Genus Psychroflexus
Genus Psychroserpens
Genus Riemerella
Genus Saligentibacter
Genus Tenacibaculum Tenacibaculum amylolyticum Tenacibaculum cellulophagum Tenacibaculum echinicida ※エゾバフンウニ斑点病原因菌 Tenacibaculum lutimaris Tenacibaculum maritimum ※海水性滑走細菌症原因菌
syn.Flexibacter maritimus Tenacibaculum mesophilum Tenacibaculum ovolyticum Tenacibaculum skagerrakense
Genus Weeksella
＊ Family Myroidaceae
＊ Phylum Chlamydiae
＊ Class Chlamydiae
＊ Order Chlamydiales
＊ Family Chlamydiaceae
Genus Chlamydia
Genus Chlamydophila
Genus Epitheliocystis ※エピテリオキスティス症 →現在は真菌類
＊ Phylum Chlorobi
＊ Phylum Chloroflexi
＊ Phylum Chrysiogenetes
＊ Phylum Cyanobacteria →植物の分類参照
＊ Phylum Deferribacteres
＊ Phylum Dictyoglomi
＊ Phylum Fibrobacteres
＊ Phylum Firmicutes
＊ Class Bacilli
＊ Order Bacillales
＊ Family Alicyclobacillaceae
＊ Family Bacillaceae
Genus Amphibacillus
Genus Anoxybacillus
Genus Bacillus Bacillus anthracis 炭疽菌 Bacillus butylicus Bacillus cereus Bacillus circulans Bacillus coagulans Bacillus coli Bacillus firmus Bacillus globisporus Bacillus infernus Bacillus larvae Bacillus licheniformis Bacillus megaterium Bacillus piliformis Bacillus polymyxa Bacillus sphaericus Bacillus stearothermophilus Bacillus subtilis 枯草菌 Bacillus thuringiensis ※養殖ナマズの急性貧血症候群原因菌
Genus Exiguobacterium
Genus Gracilibacillus
Genus Halobacillus
Genus Saccharococcus
Genus Salibacillus
Genus Virgibacillus
＊ Family Caryophanaceae
＊ Family Listeriaceae
＊ Family Paenibacillaceae
＊ Family Planococcaceae
＊ Family Staphylococcaceae 葡萄球菌科
Genus Staphylococcus 葡萄球菌属 Staphylococcus aureus 黄色葡萄球菌 ※葡萄球菌感染症(魚類)原因菌 Staphylococcus epidermidis 表皮葡萄球菌 Staphylococcus intermedius Staphylococcus lactis Staphylococcus saprophyticus 腐生葡萄球菌
＊ Family Sporolactobacillaceae
＊ Family Thermoactinomycetaceae
＊ Order Lactobacillales
＊ Family Aerococcaceae
＊ Family Carnobacteriaceae
＊ Family Enterococcaceae
Genus Atopobacter
Genus Enterococcus Enterococcus faecalis 糞便連鎖球菌
Genus Melissococcus
Genus Tetragenococcus
Genus Vagococcus
＊ Family Lactobacillaceae
Genus Carnobacterium Lactobacillus属に統合？ Carnobacterium inhibens ※サケマス類
Genus Lactobacillus
＊ Family Leuconostocaceae
＊ Family Streptococcaceae ※連鎖球菌感染症
Genus Aerococcus
Genus Gemella
Genus Lactococcus Lactococcus garvieae 鰤連鎖球菌 ※(ブリの)連鎖球菌感染症原因菌
syn.Carnobacterium maltaromaticum Carnobacterium piscicola Enterococcus seriolicida Lactococcus lactis Lactococcus lactis ssp.cremoris Lactococcus lactis ssp.hordniae Lactococcus lactis ssp.lactis Lactococcus piscium ※サケマス類 Lactococcus plantarum Lactococcus raffinolactis
Genus Leuconostoc
Genus Pediococcus
Genus Streptococcus Streptococcus agalactiae Ｂ群連鎖球菌 Streptococcus cremoris Streptococcus diacetilactis Streptococcus equi Streptococcus faecalis Streptococcus haemolyticus Streptococcus hollandicus Streptococcus iniae ※連鎖球菌症(ティラピアの狂魚病)原因菌 Streptococcus lactis Streptococcus mutans Streptococcus pluton Streptococcus pneumoniae 肺炎連鎖球菌 Streptococcus pyogenes 化膿連鎖球菌(Ａ群溶血性レンサ球菌) ※別名人食いバクテリア。劇症型溶血性レンサ球菌感染症原因菌。 Streptococcus salivarius 唾液連鎖球菌 Streptococcus sanguis Streptococcus thermophilus Streptococcus zooepidemicus
Genus Vagococcus Vagococcus salmoninarum ※サケマス類
＊ Class Clostridia
＊ Order Clostridiales
＊ Family Acidaminococcaceae
＊ Family Clostridiaceae
Genus Acetivibrio
Genus Acidaminobacter
Genus Anaerobacter
Genus Caloramator
Genus Clostridium Clostridium aceticum Clostridium acetobutylicum Clostridium botulinum ※ボツリヌス菌タイプＥ(魚類)感染症 Clostridium butyricum Clostridium carnis Clostridium chauvoei Clostridium denitrificans Clostridium difficile Clostridium fervidus Clostridium formicoaceticum Clostridium novyi Clostridium pasteurianum Clostridium perfringens Clostridium septicum Clostridium sporogenes Clostridium tetani Clostridium thermoaceticum Clostridium thermocellum Clostridium thermosacchrolyticum Clostridium tyrobutyricum Clostridium welchii
Genus Coprobacillus
Genus Natronincola
Genus Oxobacter
Genus Sarcina
Genus Sporobacter
Genus Thermobrachium
Genus Thermohalobacter
Genus Tindallia
＊ Family Eubacteriaceae
＊ Family Heliobacteriaceae
＊ Family Lachnospiraceae
＊ Family Peptostreptococcacea
＊ Family Peptococcaceae
＊ Family Syntrophomonadaceae
＊ Order Haloanaerobiales
＊ Order Thermoanaerobacteriales
＊ Class Mollicutes
＊ Phylum Fusobacteria
＊ Phylum Gemmatimonadetes
＊ Phylum Nitrospirae
＊ Class Nitrospira
＊ Order Nitrospirales
＊ Family "Nitrospiraceae
Genus Leptospirillum
Genus Magnetobacterium
Genus Nitrospira 亜硝酸酸化菌(硝酸菌)。亜硝酸→硝酸塩。 Nitrospira marina Nitrospira moscoviensis
Genus Thermodesulfovibrio
＊ Phylum Planctomycetes
＊ Phylum Proteobacteria
＊ Class Alphaproteobacteria
＊ Order Caulobacterales
＊ Order Rhizobiales
＊ Family Bartonellaceae
＊ Family Beijerinckiaceae
＊ Family Bradyrhizobiaceae ※土壌細菌
Genus Afipia
Genus Agromonas
Genus Blastobacter
Genus Bosea
Genus Bradyrhizobium
Genus Nitrobacter 亜硝酸酸化菌(硝酸菌)。亜硝酸→硝酸塩。 Nitrobacter alkalicus Nitrobacter hamburgensis Nitrobacter vulgaris Nitrobacter winogradskyi
Genus Nitrococcus 亜硝酸酸化菌(硝酸菌)。亜硝酸→硝酸塩。 Nitrococcus mobilis
Genus Oligotropha
Genus Rhodopseudomonas
＊ Family Brucellaceae
＊ Family Hyphomicrobiaceae
＊ Family Methylobacteriaceae
＊ Family Methylocystaceae
＊ Family Phyllobacteriaceae
＊ Family Rhizobiaceae
＊ Family Rhodobiaceae
＊ Order Rickettsiales
＊ Family Ehrlichiaceae
Genus Aegyptianella
Genus Anaplasma
Genus Cowdria
Genus Ehrlichia
Genus Neorickettsia Neorickettsia helminthoeca ※吸虫が媒介するネオリケッチア症原因菌(魚病とは考えられていない)
Genus Xenohaliotis
＊ Family Holosporaceae
＊ Family Rickettsiaceae
Genus Orientia
Genus Rickettsia
Genus Wolbachia
＊ Family Piscirickettsiaceae
Genus Piscirickettsia Piscirickettsia salmonis ※ピスキリケッチア症原因菌
＊ Order Rhodobacterales
＊ Order Rhodospirillales
＊ Order Sphingomonadales
＊ Class Betaproteobacteria
＊ Order Burkholderiales
＊ Order Hydrogenophilales
＊ Order Methylophilales
＊ Order Neisseriales
＊ Order Nitrosomonadales
＊ Family Nitrosomonadaceae ※アンモニア酸化菌(亜硝酸菌)。アンモニア(アンモニウムイオン)→亜硝酸。
Genus Nitrosococcus Nitrosococcus nitrosus Nitrosococcus halophilus Nitrosococcus oceanus
Genus Nitrosolobus Nitrosolobus multiformis
syn.Nitrosospira multiformis
Genus Nitrosomonas Nitrosomonas cryotolerans Nitrosomonas europaea Nitrosomonas oligotropha
Genus Nitrosospira Nitrosospira briensis
Genus Nitrosovibrio Nitrosovibrio tenuis
syn.Nitrosospira tenuis
＊ Order Rhodocyclales
＊ Class Deltaproteobacteria
＊ Class Epsilonproteobacteria
＊ Class Gammaproteobacteria
＊ Order Acidithiobacillales
＊ Order Aeromonadales
＊ Family Aeromonadaceae
Genus Aeromonas Aeromonas caviae Aeromonas hydrophylia ※運動性エロモナス症Ａ・運動性エロモナス症Ｂ(＋Pseudomonas fluorescens)原因菌 Aeromonas punctata Aeromonas salmonicida ※非定型エロモナス症 Aeromonas salmonicida ssp.achromogens ※コイ・金魚 Aeromonas salmonicida ssp.masoucida ※サケマス類 Aeromonas salmonicida ssp.salmonicida ※サケマス類 Aeromonas sobriae
＊ Order Alteromonadales
＊ Family Alteromonadaceae
Genus Alishewanella
Genus Alteromonas Alteromonas addita Alteromonas atlantica Alteromonas aurantia Alteromonas carrageenovora Alteromonas citrea Alteromonas colwelliana Alteromonas communis Alteromonas denitrificans Alteromonas distincta Alteromonas elyakovii Alteromonas espejiana Alteromonas fuliginea Alteromonas haloplanktis Alteromonas hanedai Alteromonas litorea Alteromonas luteoviolacea Alteromonas macleodii Alteromonas marina Alteromonas nigrifaciens Alteromonas putrefaciens Alteromonas rubra Alteromonas stellipolaris Alteromonas tetraodonis ※Tetrodotoxinに関連 Alteromonas undina Alteromonas vaga
Genus Glaciecola
Genus Marinobacter
Genus Marinobacterium
Genus Microbulbifer
＊ Family Colwelliaceae
Genus Colwellia
Genus Idiomarina
Genus Oceanimonas
Genus Oceanisphaera
Genus Thalassomonas
＊ Family Ferrimonadaceae
＊ Family Idiomarinaceae
＊ Family Moritellaceae
＊ Family Pseudoalteromonadaceae
Genus Algicola
Genus Pseudoalteromonas ※海棲 Pseudoalteromonas agarivorans Pseudoalteromonas antarctica Pseudoalteromonas atlantica Pseudoalteromonas aurantia Pseudoalteromonas bacteriolytica Pseudoalteromonas carrageenovora Pseudoalteromonas citrea Pseudoalteromonas denitrificans Pseudoalteromonas distincta Pseudoalteromonas elyakovii Pseudoalteromonas espejiana Pseudoalteromonas flavipulchra Pseudoalteromonas haloplanktis Pseudoalteromonas issachenkonii Pseudoalteromonas luteoviolacea Pseudoalteromonas maricaloris Pseudoalteromonas mariniglutinosa Pseudoalteromonas nigrifaciens Pseudoalteromonas paragorgicola Pseudoalteromonas peptidolytica Pseudoalteromonas phenolica Pseudoalteromonas piscicida Pseudoalteromonas prydzensis Pseudoalteromonas rubra Pseudoalteromonas ruthenica Pseudoalteromonas sagamiensis Pseudoalteromonas tetraodonis ※Tetrodotoxinに関連 Pseudoalteromonas translucida Pseudoalteromonas tunicata Pseudoalteromonas ulvae Pseudoalteromonas undina
＊ Family Psychromonadaceae
＊ Family Shewanellaceae
＊ Order Cardiobacteriales
＊ Order Chromatiales
＊ Order Enterobacteriales 腸内細菌目
＊ Family Enterobacteriaceae 腸内細菌科 ※本来はEscherichiaceae
Genus Alterococcus
Genus Arsenophonus
Genus Brenneria
Genus Buchnera
Genus Budvicia
Genus Buttiauxella
Genus Calymmatobacterium
Genus Cedecea
Genus Citrobacter
Genus Edwardsiella Edwardsiella hoshinae Edwardsiella ictaluri ※アメリカナマズの腸管出血症原因菌 Edwardsiella tarda ※魚壊疽原因菌
Genus Enterobacter
Genus Erwinia
Genus Escherichia (=Shigella 赤痢菌属)
Genus Ewingella
Genus Hafnia
Genus Klebsiella 肺炎桿菌属
Genus Kluyvera
Genus Leclercia
Genus Leminorella
Genus Moellerella
Genus Morganella
Genus Obesumbacterium
Genus Pantoea
Genus Pectobacterium
Genus Photorhabdus
Genus Plesiomonas
Genus Pragia
Genus Proteus
Genus Providencia (変形菌)属
Genus Rahnella
Genus Saccharobacter
Genus Salmonella ※サルモネラ菌感染症(魚病とは考えられていない)
Genus Serratia 霊菌属
Genus Sodalis
Genus Tatumella
Genus Trabulsiella
Genus Wigglesworthia
Genus Xenorhabdus
Genus Yersinia ペスト菌属 Yersinia enterocolitica Yersinia pestis ペスト菌 Yersinia pseudotuberculosis Yersinia ruckeri ※腸管性口赤病原因菌
Genus Yokenella
＊ Order Legionellales
＊ Order Methylococcales
＊ Order Oceanospirillales
＊ Order Pasteurellales
Genus Actinobacillus
Genus Francisella ※イサキの肉芽腫症(命名されていない) Francisella tularensis ※野兎病
syn.Francisella novicida
Genus Haemophilus Haemophilus aegyptus Haemophilus gallinarum Haemophilus influenzae インフルエンザ菌 Haemophilus paragallinarum Haemophilus parainfluenzae Haemophilus piscium ※鰭腐れ病(＋Aeromonas salmonicida)
Genus Lonepinella
Genus Mannheimia
Genus Pasteurella
Genus Phocoenobacter
＊ Order Pseudomonadales
＊ Family Athiorhodaceae
＊ Family Moraxellaceae
＊ Family Nitrobacteriaceae
＊ Family Pseudomonadaceae
Genus Burkholderia
Genus Pseudomonas ※未特定の本属がTetrodotoxinに関連 Pseudomonas acidovorans Pseudomonas aeruginosa Pseudomonas aeruginosa ssp.aeruginosa 緑膿菌 Pseudomonas aeruginosa ssp.erythrogenes Pseudomonas agarici Pseudomonas alcaligenes Pseudomonas anguilliseptica ※ウナギのせっそう病(養殖ウナギの赤点病) Pseudomonas asplenii Pseudomonas chlororaphis Pseudomonas cichorii Pseudomonas corrugata Pseudomonas diminuta Pseudomonas fluorescens 蛍光菌 ※運動性エロモナス症Ｂ(Aeromonas hydrophyliaと共謀) Pseudomonas fragi Pseudomonas luteola Pseudomonas mallei 鼻疽菌 Pseudomonas maltophilia Pseudomonas marginalis Pseudomonas mendocina ※アユのシュードモナス症Ｂ Pseudomonas nautica Pseudomonas oleovorans Pseudomonas plecoglossicida ※細菌性出血性腹水病(アユのシュードモナス症Ａ) Pseudomonas pseudoalcaligenes Pseudomonas pseudomallei 類鼻疽菌 Pseudomonas putida ※アユのシュードモナス症Ｃ。細菌性出血性腹水病に類似？Opsanus tauなど Pseudomonas rhizosphaerae Pseudomonas savastanoi Pseudomonas solanacearum Pseudomonas stutzeri Pseudomonas syringae Pseudomonas testosteroni Pseudomonas tolaasii Pseudomonas viridiflava Pseudomonas woodsii
＊ Family Spirillaceae
＊ Family Thiobacteriaceae
＊ Order Thiotrichales
＊ Order Vibrionales
＊ Family Vibrionaceae
Genus Allomonas
Genus Enhydrobacter
Genus Listonella Listonella anguillarum ※ビブリオ症(ウナギ)原因菌
syn.Vibrio anguillarum
Genus Photobacterium Photobacterium damselae Photobacterium damselae ssp.anguillarum ※ビブリオ症(ウナギ)原因菌 Photobacterium damselae ssp.damselae ※スズメダイの潰瘍性病変原因菌。人食いバクテリア(連鎖球菌型と異なる)
syn.Listonella damsela Photobacterium damselae ssp.piscicida ※類結節症(魚類)原因菌
syn.Pasteurella piscicida Photobacterium fisheri Photobacterium histaminum Photobacterium phosphoreum ※Tetrodotoxinに関連
Genus Salinivibrio
Genus Vibrio Vibrio alginolyticus ※Tetrodotoxinに関連 Vibrio cholerae コレラ菌 Vibrio costicolus Vibrio fuluvialis Vibrio harveyi ※伝染性壊死性腸炎原因菌 Vibrio marinus Vibrio metschnikovii Vibrio natriegens Vibrio ordalii ※ビブリオ症(魚類)原因菌 Vibrio parahaemolyticus 腸炎ビブリオ Vibrio salmonicida ※ビブリオ(魚類)症原因菌 Vibrio viscosus ※ビブリオ症(魚類)原因菌 Vibrio wodanis ※ビブリオ症(魚類)原因菌 Vibrio vulnificus
＊ Order Xanthomonadales
＊ Phylum Spirochaetes ※Spirochaetalesに格上げ？
＊ Family Spirochaetaceae
Genus Borrelia
Genus Cristispira
Genus Spirochaeta
Genus Treponema
＊ Family Leptospiraceae
Genus Leptospira
＊ Phylum Thermodesulfobacteria
＊ Phylum Thermotogae
＊ Phylum Verrucomicrobia
